OU Supercomputing Center for Education & Research
University of Oklahoma   OSCER   OU IT

 

Virtual Residency Introductory Workshop 2022

hosted at
the University of Oklahoma (OU)
and available live via videoconferencing
Monday June 27 - Friday July 1 2022

Table of Contents


Registration

Click here to register!


Other Virtual Residency Workshops


2022 Virtual Residency Workshop Attendance

    Coming after the workshop!


Sponsors

NON-COMMERCIAL

National Science Foundation

  • NSF Grant No. 1548562
    "XSEDE 2.0: Integrating, Enabling and Enhancing National Cyberinfrastructure with Expanding Community Involvement"


AGENDA (TENTATIVE)

NOTES:
  • All times are APPROXIMATE.
  • This agenda is SUBJECT TO CHANGE WITHOUT NOTICE.
  • We may not cover everything on this agenda, and we may cover topics not on this agenda.

  • Monday June 27
    • 9:00-10:15am CT:
      TALK:
      "Virtual Residency Introductory Workshop 2022 Overview"
      Henry Neeman, U Oklahoma
      This session will introduce both the Virtual Residency Program and this year's workshop.
      Slides:   PowerPoint     PDF
      Google Doc folder for discussion
      Video:   See below.
    • 10:15-10:45am CT:
      MIDMORNING BREAK
    • 10:45am-12:00noon CT:
      TALK:
      Introductory:
      "Effective Communication: How to Talk to Researchers About Their Research"
      Henry Neeman, U Oklahoma
      In this session, we'll discuss research terminology, research computing versus enterprise IT, the mindset gap, things to say to a researcher, and how to find researchers and their projects.
      Slides:   PowerPoint     PDF
      Google Doc folder for discussion
      Video:   See below.
    • 12:00noon-1:30pm CT:
      LUNCHTIME BREAK
    • 1:30-2:45pm CT:
      TALK:
      Introductory:
      "Faculty: Tenure, Promotion, Reward System"
      Bruce Mason, U Oklahoma
      Do the academic faculty and researchers with whom you work seem distracted, unresponsive, or stressed at times? Often? This session will be a discussion of the academic promotion and reward systems and changes in these systems. This might give you some insight into the thinking of researchers that can help with collaborations.
      Slides:       PowerPoint     PDF
      Google Doc folder for discussion
      Video:   See below.
    • 2:45-3:15pm CT:
      MIDAFTERNOON BREAK
    • 3:15-4:30pm CT:
      TALK: Introductory:
      "Cyberinfrastructure User Support"
      Dylan Perkins, U Colorado Boulder
      This presentation will discuss topics such as: CI user expectations; CI categorization and commonalities; difficulties encountered by HPC support teams and users; best methods and strategies to follow for CI users support; approaches to common HPC user problems; CI outreach, education and training.
      Slides:   PowerPoint
      Google Doc folder for discussion
      Video:   See below.
    • 4:30-5:00pm CT:
      End-of-day Wrapup
      Video:   See below.
  • Tuesday June 28
    • 9:00-10:15am CT:
      TALK:
      Introductory:
      "The Cyberinfrastructure Landscape: Systems, Service Providers, Technologies"
      Jacob Fosso Tande, U North Carolina Greensboro
      The diversity, scale and scope of the national CI landscape is sufficient rich and complex that researchers have to devote time and patience to determine which resource will best meet their needs. We will explore available systems, services providers and technologies, while focusing on where and how to access these resources.
      Slides:   PDF
      Google Doc folder for discussion
      Video:   See below.
    • 10:15-10:45am CT:
      MIDMORNING BREAK
    • 10:45am-12:00noon CT:
      TALK/DEMONSTRATION:
      Introductory:
      "How to Do an Intake Interview" / "Intake Interview Demonstrations"
      Dirk Colbry, Michigan State U
      Slides:   PowerPoint
      Demonstration videos:
      Video 1
      Video 2
      Video 3
      Google Doc folder for discussion
      Video:   See below.
    • 12:00noon-1:30pm CT:
      LUNCHTIME BREAK
    • 1:30-2:45pm CT:
      TALK:
      Introductory:
      "Components and Design of a High Performance Computing Cluster"
      Jerry Perez, U Texas Dallas
      This talk will describe the various components and designs of an HPC Cluster.
      Slides: PowerPoint
      Google Doc folder for discussion
      Video:   See below.
    • 2:45-3:15pm CT:
      MIDAFTERNOON BREAK
    • 3:15-4:30pm CT:
      TALK:
      Introductory:
      "Research Networking Overview"
      Wallace Chase, U Otago (New Zealand)
      The internet is fine – I'm on Facebook right now!
      A discussion on how networking in support of data intensive research is not at all the same as networking for general use.
      Slides:   PowerPoint     PDF
      Google Doc folder for discussion
      Video:   See below.
    • 4:30-5:00pm CT:
      End-of-day Wrapup
      Video:   See below.
  • Wednesday June 29
    • 9:00-10:15am CT:
      TALK:
      Introductory:
      "CyberAmbassadors: Let's Talk: Communicating That There's a Problem"
      Dirk Colbry, Michigan State U
      Strong interpersonal communication skills can foster success in both professional and personal situations. This session will focuses on building participants' capacity to engage in meaningful, one-on-one conversations about challenging topics. Participants will explore common types of problems and practice skills for resolving ability, motivation and interpersonal problem situations.
      Slides:   PowerPoint     PDF
      Google Doc folder for discussion
      Video:   See below.
    • 10:15-10:45am CT:
      MIDMORNING BREAK
    • 10:45am-12:00noon CT:
      PANEL:
      "Researcher Perspectives: What Do Researchers Need from Cyberinfrastructure Facilitators?"
      Moderator: Annelie Rugg, U California Los Angeles
      Panelists:
      Catalina Amuedo-Dorantes, U California Merced: Social Sciences
      Carl Boettiger, U California Berkeley: Biosciences
      Phil Bording, Alabama A&M U: Physical Sciences/Engineering
      Keith Brewster, U Oklahoma: Physical Sciences
      Ajay Kurani, Northwestern U: Clinical/Bioscience/Engineering
      Jihong Ma, U Vermont: Physical Sciences/Engineering

      Questions for the panelists (we might use all of these, or none, or some, and not necessarily in this order):
      1. To what extent do you see your research dependent on research computing and data services today, and how do you see that evolving in future? What about in your research community more broadly?
      2. Are there research facilitators at your institution and if so, have you worked with them? What do they primarily help with? If not, from whom (what roles) have you gotten help and for what?
      3. What is the value and importance of having talented research computing staff? If you had to choose, would you choose more hardware or more research computing staff?
      4. Thinking about research computing staff, which is more important to you, disciplinary expertise or research computing expertise? Why is that more important?
      5. What are the challenges and obstacles to adopting research computing in your own research, and more broadly in your research community?
      6. What relationship do you want with your institution's research computing facility? Should it be integrated into your work, or kept at arm's length?
      7. Can you give an example of an experience you've had working with a research computing facilitator that exemplifies the value of doing that?
      8. Now give an example where something went horribly wrong. What would have improved that situation (worst case) in hindsight?
      9. What would you most want a research facilitator to know about your work and your needs so they can be most helpful to you?

      Google Doc folder for discussion
      Video:   See below.
    • 12:00noon-1:30pm CT:
      LUNCHTIME BREAK
    • 1:30-2:45pm CT:
      TALK/PRACTICUM:
      Introductory:
      "How to Do an Intake Interview" / "Intake Interviews with Real Researchers"
      Arman Pazouki, Northwestern U
      In this session, the CI Facilitators and those who are interested in pursuing a CI Facilitation career will find several opportunities to learn about intake interview best practices, conduct short intake interviews with various researchers, apply foundations of CI Facilitation, and receive feedback from experienced CI Facilitators.
      Slides:   PowerPoint
      Google Doc folder for discussion
      Video:   See below.
    • 2:45-3:15pm CT:
      MIDAFTERNOON BREAK
    • 3:15-3:50pm CT:
      TALK:
      Introductory:
      "Deploying Community Codes"
      Josh Gyllinsky, U Rhode Island
      Slides:   PDF
      Video:   See below.
    • 3:55-4:30pm CT:
      TALK:
      Introductory:
      "Debugging and Tuning"
      Prasad Maddumage, Florida State U
      Debugging is an essential part of software development. In fact, most software developers spend more time debugging their codes than writing them. The role of debuggers is to help this process. These range from gdb, a free command line tool, to paid GUI software such as TotalView and DDT. We will discuss few different debuggers available for serial and parallel debugging.
      Tuning refers to increase efficiency of existing software and this involves profiling codes to find room for optimization. It is very important to improve efficiency and scaling of software in general and especially in the context of HPC.
      Slides:   PDF
      Google Doc folder for discussion
      Video:   See below.
    • 4:30-5:00pm CT:
      End-of-day Wrapup
      Video:   See below.
  • Thursday June 30
    • 9:00-10:15am CT:
      TALK:
      Introductory:
      "The Cyberinfrastructure Landscape: Organizations"
      Dana Brunson, Internet2
      Timothy Middelkoop, Internet2
      The number of organizations in the Cyberinfrastructure landscape can be overwhelming. How can you tell which ones will be helpful to you? In this session, we'll provide a whirlwind tour of the benefits of various organizations, where you might want to start, and why you may want to engage with them.
      Slides:   PowerPoint     PDF
      Google Doc folder for discussion
      Video:   See below.
    • 10:15-10:45am CT:
      MIDMORNING BREAK
    • 10:45am-12:00noon CT:
      TALK:
      INTRODUCTORY:
      "CyberAmbassadors: Leading the Change: Equity and Inclusion; Leading with Principles: Ethics"
      Dirk Colbry, Michigan State U
      Diversity, in many dimensions, offers both challenges and opportunities to any relationship. Learning to identify, reflect upon, learn from, and engage with diverse perspectives is essential to fostering effective relationships and vibrant intellectual environments. "Leading the Change" explores challenges and solutions for creating more inclusive communities in STEM.
      STEM professionals play an important role in both teaching and modeling ethical behavior. There are ethical issues centering on the underlying technology: how to set up, maintain and secure resources, and how to use them appropriately to support research and practice. There are also ethical issues surrounding the relationships between STEM professionals and their colleagues, supervisors, and the public. Reflecting upon and discussing ethical behavior is an important part of becoming an effective STEM professional.
      Slides:   PowerPoint     PDF
      Google Doc folder for discussion
      Video:   See below.
    • 12:00noon-1:30pm CT:
      LUNCHTIME BREAK
    • 1:30-2:45pm CT:
      PANEL:
      INTRODUCTORY:
      "Cyberinfrastructure Organization Leader Perspectives: What Do CI Organizations Need from Their CI Facilitators?"
      Moderator:
      Sandra Gesing, U Illinois Chicago
      Panelists:
      Kevin Brandt, South Dakota State U (R2, public, EPSCoR)
      Sarvani Chadalapaka, U California Merced (R2, public)
      Curt Hilegas, Princeton U (R1, private)
      Himanshu Sharma, U Illinois Chicago (R1, public, Minority Serving)
      Jason Simms, Lafayette College (non-PhD-granting, private)
      Lisa Snyder, U California Los Angeles (R1, public)
      Questions for the panelists (we might use all of these, or none, or some, and not necessarily in this order):
      1. At your institution, what kinds of researcher-facing roles do you have, and what do these folks do?
      2. What qualities and skills do you look for in a research computing facilitator? Do you prioritize generalized/broad CI skills, or discipline-specific skills? How do you balance the need for technical skills versus the need for professional/interpersonal skills?
      3. What sort of professional development opportunities do your research computing facilitators need, and how do you provide those? What do you prioritize for their professional development?
      4. What is your institution's view of a funding model that addresses the needs of the full spectrum of computing-intensive/data-intensive researchers, not just the biggest consumers, and how well is that spectrum of needs addressed?
      5. How does your center apportion resources among the diverse needs of your various research constituencies?
      6. What resources should an institution's central research computing facility provide to the institution's researchers?
      7. What should be the balance between research computing facilities on-campus versus remote, for example at national research computing centers? What circumstances govern the need for one or the other?
      8. Does your institution have research data management policies and/or practices? Who is responsible for implementing your institution's policies and/or practices? How have these policies/practices positively impacted researcher needs around research data?
      9. We ask researchers what they may need, but often researchers don't have a clear idea of what HPC is, even if they're actively using it — for example, researchers who run MPI codes but don't really understand how MPI jobs are distributed or the challenges of achieving parallel speedup. What mechanisms does your organization use to create an HPC baseline, beyond the very specific needs associated with successfully launching such jobs?
      Slides:   PowerPoint
      Google Doc folder for discussion
      Video:   See below.
    • 2:45-3:15pm CT:
      MIDAFTERNOON BREAK
    • 3:15-4:30pm CT:
      PANEL:
      "Working Effectively with Systems-Facing Professionals"
      Moderator:
      David Akin, U Oklahoma
      Panelists:
      Kyle Hutson, Kansas State U
      Andrew Keen, Michigan State U
      Damir Krstic, Northwestern U
      Sai Medury, Vanderbilt U
      JP Pervez, U Texas Dallas
      Questions for the panelists (we might use all of these, or none, or some, and not necessarily in this order):
      1. What are the top 3 issues that research computing facilitators should keep in mind when working with systems-facing professionals, both what to do and what not to do?
      2. How would you summarize a systems-facing professional's key responsibilities, and likewise a research computing facilitator's responsibilities? What's the division between what a research computing facilitator is responsible for versus what a sysadmin is responsible for? Is this more about who, or more about which hat someone is wearing at that moment? That is, researcher-facing or systems-facing role versus facilitator or sysadmin job title.
      3. What are the biggest pain points that systems-facing professionals encounter day to day?
      4. How can research computing facilitators help systems-facing professionals to serve their researchers more effectively, and vice versa?
      5. What can a research computing facilitator learn or do to make life for their systems professionals easier?
      6. How much does it help you as a systems-facing professional to understand what a particular researcher is investigating or trying to do?

      Slides:   coming soon
      Google Doc folder for discussion
      Video:   See below.
    • 4:30-5:00pm CT:
      End-of-day Wrapup
      Video:   See below.
  • Friday July 1
    • 9:00-10:15am CT:
      TALK:
      INTRODUCTORY:
      "Research Data Management"
      Jason Wells, Harvard U
      Research Data Management is becoming a requirement for successful grant applications. In this participation-encouraged demo, learn more about RDM and how you can help facilitate grant applications at your institution.
      Slides:   PowerPoint
      Google Doc folder for discussion
      Video:   See below.
    • 10:15-10:45am CT:
      MIDMORNING BREAK
    • 10:45-12:00noon CT:
      ROUNDTABLE:
      "Stories from the Trenches"
      Moderator: Henry Neeman, U Oklahoma
      In this session, workshop attendees will swap stories of interest to CI Facilitators.
      Slides:   coming soon
      Google Doc folder for discussion
      Video:   See below.

  • Videos

    All videos are here.


    Offsite Remote Participation via Videoconferencing

    • Slides will be posted to this webpage, typically after each session (typically PowerPoint and PDF).
       
    • Zoom:
       
      We STRONGLY recommend Zoom for all remote attendees.
       
      Please MUTE YOURSELF except when you're talking.
       
      Zoom Instructions
       
      You MUST have a Zoom account to participate.
      You can get a FREE Zoom Basic account at:
      http://zoom.us/
       
      Zoom is compatible with Windows, MacOS, Linux, iOS and Android.
       
      1. VIDEO + AUDIO (USA and non-USA users)
         
        1. Windows or MacOS or Linux
           
          Open a web browser and go to:
           
          Zoom URL available via e-mail only (to deter Zoom-bombing)
           
        2. Android or iOS
           
          Download and install the Zoom app from the store.
           
          Run the Zoom app and go to meeting ID:
           
          Zoom meeting ID available via e-mail only (to deter Zoom-bombing)
           
        Follow the instructions, and please use either (a) your full name (first/given name and last/family name) OR (b) your first/given name and your institution.
         
        Please MUTE YOURSELF except when you're talking.
         
      2. AUDIO ONLY (telephone)
         
        1. FOR USA USERS:
           
          On any USA phone:
           
          Dial:
           
          408-638-0968 (USA toll)
           
          OR
           
          646-558-8656 (USA toll)
           
          Meeting ID: Zoom meeting ID available via e-mail only (to deter Zoom-bombing)
           
          Please MUTE YOURSELF except when you're talking.
           
          NOTE: NO TOLL FREE telephone audio-only option for USA remote attendees.
           
        2. FOR NON-USA USERS:
           
          Go to
           
          https://zoom.us/zoomconference?m=GBPzosolPR18D5S7Ig55m6KM95W8UxEF
           
          for non-US toll phone numbers for the telephone audio-only option for non-USA remote attendees.
           
          Please MUTE YOURSELF except when you're talking.
           
          NOTE: NO TOLL FREE telephone audio-only option for non-USA remote attendees.
           

     

     


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